Index A | C | E | F | G | I | M | O | P | S | T | V | X A all_labels() (in module xomx.tools.utils) C colormap() (in module xomx.plotting.basic_plot) compute_logomaker_df() (in module xomx.tools.bio) confusion_matrix() (in module xomx.tools.utils) E extension() (in module xomx.plotting.basic_plot) F force_extension() (in module xomx.plotting.basic_plot) G gdc_create_data_matrix() (in module xomx.data_importation.gdc) gdc_create_manifest() (in module xomx.data_importation.gdc) I indices_per_label() (in module xomx.tools.utils) M matthews_coef() (in module xomx.tools.utils) module xomx.classifiers xomx.classifiers.ExtraTrees xomx.classifiers.multiclass xomx.data_importation xomx.data_importation.gdc xomx.feature_selection xomx.feature_selection.RFEExtraTrees xomx.plotting xomx.plotting.basic_plot xomx.tools xomx.tools.bio xomx.tools.utils O obs_indices() (in module xomx.tools.utils) onehot() (in module xomx.tools.bio) onehot_inverse() (in module xomx.tools.bio) P plot() (in module xomx.plotting.basic_plot) plot_2d_obsm() (in module xomx.plotting.basic_plot) plot_2d_varm() (in module xomx.plotting.basic_plot) plot_3d_obsm() (in module xomx.plotting.basic_plot) plot_3d_varm() (in module xomx.plotting.basic_plot) plot_scores() (in module xomx.plotting.basic_plot) plot_var() (in module xomx.plotting.basic_plot) S scatter() (in module xomx.plotting.basic_plot) scatter2d_and_3d() (in module xomx.plotting.basic_plot) ScoreBasedMulticlass (class in xomx.classifiers.multiclass) T to_float() (in module xomx.tools.bio) to_float_inverse() (in module xomx.tools.bio) train_and_test_indices() (in module xomx.tools.utils) V var_indices() (in module xomx.tools.utils) var_mean_values() (in module xomx.tools.utils) var_standard_deviations() (in module xomx.tools.utils) X xomx.classifiers module xomx.classifiers.ExtraTrees module xomx.classifiers.multiclass module xomx.data_importation module xomx.data_importation.gdc module xomx.feature_selection module xomx.feature_selection.RFEExtraTrees module xomx.plotting module xomx.plotting.basic_plot module xomx.tools module xomx.tools.bio module xomx.tools.utils module